2019, Number 1
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Enf Infec Microbiol 2019; 39 (1)
Validation of a multiplex PCR technique for the detection of toxigenic Vibrio cholera
Quino W, Pompa IJ, Zamudio ML, Aguilera C, Juscamayta E, G Gavilán R
Language: Spanish
References: 27
Page: 19-27
PDF size: 792.88 Kb.
ABSTRACT
Cholera is one of the most serious diarrheal diseases, responsible for causing at least seven pandemics in the world. Among
the virulence factors associated with this disease is cholera toxin, encoded by the
ctxA gene and the pilus coregulator of toxin
encoded by the
tcpA gene, plays an important role in pathogenicity.
Objective. To validate a multiplex PCR technique for the diagnosis of toxigenic
Vibrio cholerae based on the detection of
Vc-m,
ctxA and
tcpA genes.
Methods. The validation of the technique was carried out in the National Institutes of Health’s Laboratory of Enteropathogens,
using conventional PCR (Vc-m) and PCR multiplex (ctxA-tcpA) assays, and the standardization of multiplex PCR with three targets
(
Vc-m/ctxA/tcpA), validation was performed with 51 clinical isolates of toxigenic
Vibrio cholerae (
ctxA) and 31 non-
ctxA-producing
strains of different genera. The range of work, selectivity, robustness, sensitivity, specificity, positive predictive value and positive
predictive value of the technique were determined.
Results. The methodology was validated, obtaining a detection range ranging from 10
-0 dilution to 10
-2. Robustness was optimal
when modifying different variables. We obtained 100% inclusivity, exclusivity, analytical precision, positive predictive value and
negative predictive value, as well as sensitivity and specificity.
Conclusions. The standardization and subsequent validation of multiplex PCR (
Vc-m/ctxA/tcpA), performed by different operators,
corroborates the parameters considered, confirmed the repeatability and reproducibility of the technique, thus providing
a fast, safe and selective for the identification of toxigenic
Vibrio cholerae isolates from clinical isolates after primary isolation.
REFERENCES
Pang, B., Yan, M., Cui, Z., Ye, X., Diao, B. y Ren, Y., “Genetic diversity of toxigenic and nontoxigenic Vibrio cholerae serogroups O1 and O139 revealed by arraybased comparative genomic hybridization”, Journal of Bacteriology, 2007: 4837-4849.
Barua, D., History of cholera, Nueva York, Plenum, 1992.
Colwell, R., “Global climate and infectious disease: the cholera paradigm”, Science, 1996, 274: 2025-2031.
Goel, A.K., Ponmariappan, S., Kambol, D.V. y Singh, L., “Single multiplex polymerase chain reaction for environmental surveillance of toxigenic-pathogenic O1 and non- O1 Vibrio cholerae”, Folia Microbiol, 2007, 52: 81-85.
Xu, J., Zhang, J., Lu, X., Liang, W., Zhang, L. y Kan, B., “O antigen is the receptor of Vibrio cholerae serogroup O1 El Tor typing phage VP4”, J Bacteriol, 2013, 195: 798-806.
De, S.N., “Enterotoxicity of bacteria-free culture filtrate of Vibrio cholerae”, Nature, 1959, 183: 1533-1534.
Taylor, R.K., Miller, V.L., Furlong, D.B. y Mekalanos, J.J., “Use of pho gene fusions to identify a pilus colonization factor coordinately regulated with cholera toxin”, Proc Natl Acad Sci, 1987, 84: 2833-2837.
Dalmasso, A., Civera, T. y Bottero, M.T., “Multiplex primer-extension assay for identification of six pathogenic vibrios”, International Journal of Food Microbiology, 2009, 129: 21-25.
Kaper, J.B., Morris, J.G. Jr. y Levine, M.M., “Cholera”, Clinical Microbiology Reviews, 1995, 8: 48-86.
You, Y., Fu, C., Zeng, X., Fang, D., Yan, X., Sun B. et al., “A novel dna microarray for rapid diagnosis of enteropathogenic bacteria in stool specimens of patients with diarrhea”, Journal of Microbiological Methods, 2008, 75: 566-571.
Kumar, P., Peter, W.A. y Thomas, S., “Rapid detection of virulence-associated genes in environmental strains of Vibrio cholerae by multiplex pcr”, Current Microbiology, 2010, 3: 199-202.
Kurazono, H., Pal, A., Bag, P.K., Nair, G.B., Karasawa, T.T., Mihara, T. et al., “Distribution of genes encoding cholera toxin, zonula occludens toxin accessory cholera toxin, and El Tor hemolysin in Vibrio cholerae of diverse origins”, Microbial Pathogenesis, 1995, 18: 231-235.
Faruque, S.M., Albert, M.J. y Mekalanos, J.J., “Epidemiology, genetics, and ecology of toxigenic Vibrio cholerae, Microbiol Mol Biol Rev, 1998, 62: 1301-1314.
Pichel, M., Rivas, M., Martin, F., Ibarra, C. y Binszttein, N., “Genetic diversity and emergence of a new variant of Vibrio cholerae O1 isolated in Argentina”, J Clin Microbiol, 2003, 41: 124-134.
Perilla, M.J. et al., Manual de laboratorio para la identificación y prueba de susceptibilidad a los antimicrobianos de patógenos bacterianos de importancia para la salud pública en el mundo en desarrollo, Organización Mundial de la Salud, Ginebra, 2003.
Mehrabadi, J.F., Morsali, P., Nejad, H.R. e Imani Fooladi, A.A., “Detection of toxigenic Vibrio cholerae with new multiplex pcr”, J Infect Public Health, 2012, 5 (3): 263-267.
Tarr, C.L., Patel, J.S., Puhr, N.D., Sowers, E.G., Bopp, C.A. y Strockbine, N.A., “Identification of Vibrio isolates by a multiplex pcr assay and rpoB sequence determination”, Journal of Clinical Microbiology, 2007: 134-140.
Chun, J., Huq, A. y Colwell, R.R., “Analysis of 16S-23S rrna intergenic spacer regions of Vibrio cholerae and Vibrio mimicus”, Applied and Environmental Microbiology, 1999, 65 (5): 2202–2208.
Rivera, I., Lipp, E., Gil, A., Choopun, N., Huq, A. y Colwell, R., “Method for extraction and application of multiplex pcr to detect toxigenic V. cholerae O1 and O139 from aquatic ecosystems”, Environm Microbiol, 2003, 5: 599-606.
Nandi, B., Nandy, R.K., Mukhopadhyay, S., Nair, G.B., Shimada, T., Asoke, C. et al., “Rapid method for speciesspecific identification of Vibrio cholerae using primers targeted to the gene of outer membrane protein Omp W”, Journal of Clinical Microbiology, 2000, 38 (11): 4145-4151.
Fields, P.I., Popovic, T., Wachsmuth, K. y Olsvik, O., “Use of polymerase chain reaction for detection ot toxigenic Vibrio cholerae O1 strains from the Latin American cholera epidemics”, J Clin Microbiol, 1992, 30: 2128-2121.
Binsztein, N., Costagliola, M., Pichel, M., Jurquiza, V., Ramírez, F., Akselman, R., Vacchino, M., Huq, A. y Colwell, R., “Viable but nonculturable Vibrio cholerae O1 in the aquatic environment of Argentina”, Appl Environ Microbiol, 2004, 70: 7481-7486.
González Fraga, S., Villagra-Trejo, A., Pichel, M., Figueroa, S., Merletti, G., Caffer, M., Cecilia-Castillo, M. y Binsztein, N., “Caracterización de aislamientos de Vibrio cholerae no-O1, no-O139 asociados a cuadros de diarrea”, Rev Argent Microbiol, 2009, 41 (1): 11-19.
Caffer, M.I. et al., Manual de procedimientos: aislamiento, identificación y caracterización de Vibrio cholerae, Instituto Nacional de Enfermedades Infecciosas-anlis Dr. Carlos Malbrán-Centro Regional de Referencia de la oms Global Salm Surv para América del Sur, 2007.
Manual de Laboratorio Cólera, Serie de Normas Técnicas N° 2, Instituto Nacional de Salud, 1994.
Trullols, E., Ruisánchez, I. y Xavier Rius, F., “Validation of analytical methods”, Trends Analyt Chem, 2004, 23: 137- 145.
Leotta, G.A., Chinen, I., Epszteyn, S., Miliwebsky, E., Melamed, I.C., Motter, M. et al., “Validación de una técnica de pcr múltiple para la detección de Escherichia coli productor de toxina Shiga”, Rev Argent Microbiol, 2005, 37: 1-10.