2011, Number 2
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Rev Mex Med Transfus 2011; 4 (2)
Transfusion science: Integration of proteomics with blood banking
Schubert P, Devine DV
Language: English
References: 57
Page: 38-47
PDF size: 87.21 Kb.
ABSTRACT
Blood banking comprises a constellation of activities from blood collection to testing and processing into individual blood components for transfusion purposes in which we seek to ensure the highest possible quality and safety. Challenged by the never-ending concerns and optimization endeavours of blood bank practice, research in transfusion medicine is currently tailored towards analyses of a variety aspect and issues spanning from donor to recipient. Over the last few years, proteomics technologies have been proven to be a valuable tool in transfusion research to tackle some of the unanswered questions in transfusion medicine. These studies include the storage lesions of platelet and red cell concentrates, changes in the platelet proteome during treatment with pathogen reduction technologies and quality assessment of plasma products. This review summarizes the current status of proteomic applications to blood banking and provides a perspective of the future.
REFERENCES
Anderson NL, Anderson NG. Proteome and proteomics: new technologies, new concepts, and new words. Electrophoresis 1998; 19: 1853-1861.
Blackstock WP, Weir MP. Proteomics: quantitative and physical mapping of cellular proteins. Trends Biotechnol 1999; 17: 121-127.
Wilkins MR, Pasquali C, Appel RD et al. From proteins to proteomes: large scale protein identification by two dimensional electrophoresis and amino acid analysis. Biotechnology (N Y) 1996; 14: 61-65.
James P. Protein identification in the post-genome era: the rapid rise of proteomics. Q Rev Biophys 1997; 30: 279-331.
Aebersold R, Mann M. Mass spectrometry- based proteomics. Nature 2003; 422: 198-207.
Corthals GL, Wasinger VC, Hochstrasser DF et al. The dynamic range of protein expression: a challenge for proteomic research. Electrophoresis 2000; 21: 1104-1115.
Zhao Y, Jensen ON. Modification-specific proteomics: strategies for characterization of post-translational modifications using enrichment techniques. Proteomics 2009; 9: 4632-4641.
Liumbruno G, D’Amici GM, Grazzini G, Zolla L. Transfusion medicine in the era of proteomics. J Proteomics 2008; 71: 34-45.
Liumbruno G, D’Alessandro A, Grazzini G et al. How has proteomics informed transfusion biology so far? Crit Rev Oncol Hematol 2010; 76: 53-72.
Thadikkaran L, Siegenthaler MA, Crettaz D et al. Recent advances in blood-related proteomics. Proteomics 2005; 5: 3019-34.
Issaq HJ, Xiao Z, Veenstra TD. Serum and plasma proteomics. Chem Rev 2007; 107: 3601-20.
Pasini EM, Kirkegaard M, Mortensen P et al. In-depth analysis of the membrane and cytosolic proteome of red blood cells. Blood 2006; 108: 791-801.
Garcia A, Prabhakar S, Brock CJ et al. Extensive analysis of the human platelet proteome by two-dimensional gel electrophoresis and mass spectrometry. Proteomics 2004; 4: 656-68.
Maguire PB, Fitzgerald DJ. Platelet proteomics. J Thromb Haemost 2003; 1: 1593-601.
Marcus K, Immler D, Sternberger J, Meyer HE. Identification of platelet proteins separated by two-dimensional gel electrophoresis and analyzed by matrix assisted laser desorption/ionization time of flight-mass spectrometry and detection of tyrosine-phosphorylated proteins. Electrophoresis 2000; 21: 2622-36.
O’Neill EE, Brock CJ, von Kriegsheim AF et al. Towards complete analysis of the platelet proteome. Proteomics 2002; 2: 288-305.
Perrotta PL, Bahou WF. Proteomics in platelet science. Curr Hematol Rep 2004; 3: 462-9.
Garcia A, Prabhakar S, Hughan S et al. Differential proteome analysis of TRAP-activated platelets: involvement of DOK-2 and phosphorylation of RGS proteins. Blood 2004; 103: 2088-95.
Garcia A, Senis YA, Antrobus R et al. A global proteomics approach identifies novel phosphorylated signaling proteins in GPVI-activated platelets: involvement of G6f, a novel platelet Grb2-binding membrane adapter. Proteomics 2006; 6: 5332-43.
Moebius J, Zahedi RP, Lewandrowski U et al. The human platelet membrane proteome reveals several new potential membrane proteins. Mol Cell Proteomics 2005; 4: 1754-61.
Garcia BA, Smalley DM, Cho H, et al. The platelet microparticle proteome. J Proteome Res 2005; 4: 1516-21.
Maynard DM, Heijnen HF, Horne MK et al. Proteomic analysis of platelet alpha-granules using mass spectrometry. J Thromb Haemost 2007; 5: 1945-1955.
Hernandez-Ruiz L, Valverde F, Jimenez-Nunez MD et al. Organellar proteomics of human platelet dense granules reveals that 14-3-3zeta is a granule protein related to atherosclerosis. J Proteome Res 2007; 6: 4449–57.
Zahedi RP, Begonja AJ, Gambaryan S et al. Phosphoproteomics of human platelets: a quest for novel activation pathways. Biochim Biophys Acta 2006; 1764: 1963–1976.
Lewandrowski U, Zahedi RP, Moebius J, Walter U, Sickmann A. Enhanced N-glycosylation site analysis of sialoglycopeptides by strong cation exchange prefractionation applied to platelet plasma membranes. Mol Cell Proteomics 2007; 6: 1933-41.
Snyder EL, Dunn BE, Giometti CS et al. Protein changes occurring during storage of platelet concentrates. A two-dimensional gel electrophoretic analysis. Transfusion 1987; 27: 335-41.
Ong SE, Mann M. Mass spectrometry-based proteomics turns quantitative. Nat Chem Biol 2005; 1: 252-62.
Thiele T, Steil L, Gebhard S et al. Profiling of alterations in platelet proteins during storage of platelet concentrates. Transfusion 2007; 47: 1221-1233.
Thon JN, Schubert P, Duguay M et al. Comprehensive proteomic analysis of protein changes during platelet storage requires complementary proteomic approaches. Transfusion 2008; 48: 425-35.
Weyrich AS, Schwertz H, Kraiss LW, Zimmerman GA. Protein synthesis by platelets: historical and new perspectives. J Thromb Haemost 2009; 7: 241-6.
Schubert P, Devine DV. De novo protein synthesis in mature platelets: a consideration for transfusion medicine. Vox Sang 2010; 99: 112-122.
Thon JN, Devine DV. Translation of glycoprotein IIIa in stored blood platelets. Transfusion 2007; 47: 2260-70.
Schwertz H, Koster S, Kahr WH et al. Anucleate platelets generate progeny. Blood 2010; 115: 3801-3809.
Greening DW, Simpson RJ. A centrifugal ultrafiltration strategy for isolating the low-molecular weight (< or = 25 K) component of human plasma proteome. J Proteomics 2010; 73: 637-648.
Stratmann B, Tschoepe D. Pathobiology and cell interactions of platelets in diabetes. Diab Vasc Dis Res 2005; 2: 16-23.
Springer DL, Miller JH, Spinelli SL et al. Platelet proteome changes associated with diabetes and during platelet storage for transfusion. J Proteome Res 2009; 8: 2261-2272.
Anniss AM, Glenister KM, Killian JJ et al. Proteomic analysis of supernatants of stored red blood cell products. Transfusion 2005; 45: 1426-1433.
Bosman GJ, Lasonder E, Groenen-Dopp YA et al. Comparative proteomics of erythrocyte aging in vivo and in vitro. J Proteomics 2010; 73: 396-402.
Bosman GJ, Lasonder E, Luten M et al. The proteome of red cell membranes and vesicles during storage in blood bank conditions. Transfusion 2008; 48: 827-835.
D’Amici GM, Rinalducci S, Zolla L. Proteomic analysis of RBC membrane protein degradation during blood storage. J Proteome Res 2007; 6: 3242-3255.
Rubin O, Crettaz D, Canellini G, et al. Microparticles in stored red blood cells: an approach using flow cytometry and proteomic tools. Vox Sang 2008; 95: 288-297.
Anderson L, Anderson NG. High resolution two-dimensional electrophoresis of human plasma proteins. Proc Natl Acad Sci USA 1977; 74: 5421-5425.
Pearson TW, Anderson NL. Use of high resolution two-dimensional gel electrophoresis for analysis of monoclonal antibodies and their specific antigens. Methods Enzymol 1983; 92: 196-220.
Bandow JE. Comparison of protein enrichment strategies for proteome analysis of plasma. Proteomics 2010; 10: 1416-1425.
Frank R, Hargreaves R. Clinical biomarkers in drug discovery and development. Nat Rev Drug Discov 2003; 2: 566-580.
Brigulla M, Thiele T, Scharf C et al. Proteomics as a tool for assessment of therapeutics in transfusion medicine: evaluation of prothrombin complex concentrates. Transfusion 2006; 46: 377-385.
Clifton JG, Huang F, Kovac S et al. Proteomic characterization of plasmaderived clotting factor VIII-von Willebrand factor concentrates. Electrophoresis 2009; 30: 3636-3646.
Clifton J, Huang F, Gaso-Sokac D et al. Use of proteomics for validation of the isolation process of clotting factor IX from human plasma. J Proteomics 2010; 73: 678-688.
van Marwijk Kooy M, Akkerman JW, van Asbeck S, Borghuis L, van Prooijen HC. UVB radiation exposes fibrinogen binding sites on platelets by activating protein kinase C via reactive oxygen species. Br J Haematol 1993; 83: 253-8.
Verhaar R, Dekkers DW, De Cuyper IM, Ginsberg MH, de Korte D, Verhoeven AJ. UV-C irradiation disrupts platelet surface disulfide bonds and activates the platelet integrin alphaIIbbeta3. Blood 2008; 112: 4935-9.
Mohr H, Steil L, Gravemann U et al. A novel approach to pathogen reduction in platelet concentrates using shortwave ultraviolet light. Transfusion 2009; 49: 2612-2624.
Schubert P, Culibrk B, Coupland D et al. Riboflavin and ultraviolet light treatment potentiates vasodilator-stimulated phosphoprotein Ser-239 phosphorylation in platelet concentrates during storage. Transfusion. 2011, doi: 10.1111/j.1537-2995.2011.03287.x.
Crettaz D, Sensebe L, Vu DH et al. Proteomics of methylene blue photo-treated plasma before and after removal of the dye by an absorbent filter. Proteomics 2004; 4: 881-891.
Steil L, Thiele T, Hammer E et al. Proteomic characterization of freeze-dried human plasma: providing treatment of bleeding disorders without the need for a cold chain. Transfusion 2008; 48: 2356-2363.
Eidelman O, Jozwik C, Huang W et al. Gender dependence for a subset of the low abundance signaling proteome in human platelets Hum Genomics Proteomics 2010; 164906-20.
Di Michele M, Thys C, Waelkens E. An integrated proteomics and genomics analysis to unravel a heterogeneous platelet secretion defect. J Proteomics 2011; 74: 902-13.
Devine DV, Schubert P. Proteomic applications in blood transfusion: working the jigsaw puzzle. Vox Sang 2011; 100: 84-91.