2006, Number 1
<< Back Next >>
Acta Pediatr Mex 2006; 27 (1)
Differential expression of RNA in fanconi´s anemia. A probable phenotype characteristic
Gutiérrez-Aguiar L, Reyes-Vivas H, Molina B, Frias S, Hernández-Alcántara G, Ortiz C, Mora de la MI, López-Velázquez G
Language: Spanish
References: 20
Page: 24-29
PDF size: 92.10 Kb.
ABSTRACT
Objective: To analyze the expression of the triosephosphate isomerase (TIM), and the ribosomal ribonucleic acid (rRNA) from eight Fanconi anemia (FA) complementation groups.
Material and methods: International reference Epstein Barr Virus-transformed lymphoblastoid cell lines, derived from FA patients, were used. The complementation groups were AF-A (HSC72), AF-B (HSC230), AF-C (HSC536), AF-D1 (HSC62N), AF-D2 (PD20), AF-E(VU130), AF-F (VU121) and AF-G (VU143). The transcription of the gene of TIM was analyzed by RT-PCR. The expression of rRNA was analyzed by denaturing electrophoresis of the total RNA, purified by the use of trizol, from cell cultures of each complementation group.
Results: The gene of TIM was expressed in a constitutive manner for the eight groups studied. A differential expression of high molecular weight RNA species in the complementation groups E and F was found. The presence of an RNA that could correspond to the 47S rRNA precursor is shown. In addition, there was a decrease on the expression of rRNA species corresponding to 28S and 18S, in the FA-F group.
Conclusions: TIM is part of glycolysis, an essential metabolic pathway, and our results showed that FA does not affect its expression. On the other hand, the expression of high molecular weight RNAs suggests that, in some complementation groups of FA, there could exist alterations in the maturation of ribosomal RNA. Such defect in the maturation of an essential molecule as rRNA, might cause complications in the course of the illness. Further studies will allow us to determine if this could be considered as a distinctive feature for the complementation groups FA-E and FA-F.
REFERENCES
Joenje H, Patel KJ. The emerging genetic and molecular basis of Fanconi anaemia. Nat Rev Genet 2001;2:446–59.
Alter BP. Fanconi´s anaemia and malignancies. Am J Hematol 1996;53:99-110.
Auerbach AD. Fanconi anaemia diagnosis and the diepoxibutane (DEB) test. Exp Hematol 1993;21:731-3
Sala-Trepat M, Rouillard D, Escarceller M, Laquerbe A, Moustacchi E, Papadopoulo D. Arrest of S-phase progression is impaired in Fanconi anaemia cells. Exp Cell Res 2000;260:208–15.
Joenje H, Oostra AB, Wijker M, di Summa FM, van Berkel CG, Rooimans MA, et al. Evidence for at least eight Fanconi anaemia genes. Am J Hum Genet 1997;61:940-44.
Meetei AR, de Winter JP, Medhurst AL, Wallisch M, Waisfisz Q, van de Vrugt HJ, Oostra AB, et al. A novel ubiquitin ligase is deficient in Fanconi anaemia. Nat Genet 2003;35:113-14.
Timmers C, Taniguchi T, Hejna J, Reifsteck C, Lucas L, Bruun D, et al. Positional cloning of a novel Fanconi anaemia gene, FANCD2. Mol Cell 2001;7:241-48.
Strathdee CA, Gavish H, Shannon WR, Buchwald M. Cloning of cDNAs for Fanconi’s anaemia by functional complementation. Nature 1992;356:763-67.
The Fanconi Anaemia/Breast Cancer Consortium. Positional cloning of the Fanconi Anaemia Group A gene. Nat Genet 1996;14:324-328.
de Winter JP, Waisfisz Q, Rooimans MA, van Berkel CG, Bosnoyan-Collins L, Alon N, et al. The Fanconi Anaemia group G gene is identical with human XRCC9. Nat Genet 1998;20:281-283.
de Winter JP, Leveille F, van Berkel CG, Rooimans MA, van Der Weel L, Steltenpool J, et al. Isolation of a cDNA representing the Fanconi Anaemia Complementation Group E gene. Am J Hum Genet 2000;67:1306-8.
de Winter JP, Rooimans MA, van Der Weel L, van Berkel CG, Alon N, Bosnoyan-Collins L, et al. The Fanconi Anaemia Complementation Gene FANCF encodes a novel protein with homology to ROM. Nat Genet 2000;24:15-16.
Koc A, Pronk JC, Alikasifoglu M, Joenje H, Altay C. Variable pathogenicity of exon 43del (FAA) in four Fanconi anaemia patients within a consanguineous family. Br J Haematol 1999;1:127-30.
Faivre L, Guardiola P, Lewis C, Dokal I, Ebell W, Zatterale A, et al. Association of complementation group and mutation type with clinical outcome in Fanconi anaemia. Blood 2000;96:4064–70.
Noltmann EA. Aldose ketose isomerases. Enzymes 1972;1:271-353.
Brown J, Daar I, Krug J, Maquat L. Characterization of the functional gene and several processed pseudogenes in the human triosephosphate isomerase gene family. Mol Cell Biol 1985;5:1694-706.
Martinov MV, Plotnikov AG, Vitvitsky VM, Ataullakhanov FI. Deficiencies of glycolytic enzymes as a possible cause of haemolytic anaemia. Biochim Biophys Acta 2000;1474: 75-87.
Enright CA, Sollner-Webb B. Ribosomal RNA processing in vertebrates. In: Higgins SJ and Hames BD. (eds.) RNA processing. A practical approach. Vol II. Oxford University Press, USA 1994;pp135-71.
Dunbar DA, Baserga SJ. The U14 snoRNA is required for 2’-O-methylation of the pre-18S rRNA in Xenopus oocytes. RNA. 1998;4:195-204.
Tollervey D, Lehtonen H, Jansen R, Kern H, Hurt EC. Temperature-sensitive mutations demonstrate roles for yeast fibrillarin in pre-rRNA processing, pre-rRNA methylation, and ribosome